RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000346 TF CHIP-SVRutR18515344 RutR repress fepB nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd fhuF nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd pmrD nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd rpoD nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd xerC nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR repress rutA nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd ulaB nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR induce carA nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd ebgA nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd fabA nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd gcd nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd ychN nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd ydhM nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd ygiF nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd yhhX nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd hyi nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd ves nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd mntH nd nd nd nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 RutR nd ypQ nd nd nd nd 18515344


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