RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.05 idi nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.42 otsB, otsA nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 0.85 ybbK, ybbJ nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.16 ybjK nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.3 ydjF nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.41 yfaX, yfaW nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 0.58 ygcK nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 0.53 clpX nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.78 ptrA nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 0.77 trs5_1, mmuP nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.03 ybeR, ybeS nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.08 ybeX nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.23 ydfJ, ydjK nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1 ynaE nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 0.69 malI, hdhA nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.37 uvrB nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1 yebN nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.12 cadB, cadA nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 0.84 intD nd nd nd nd 16264194
  HTRI00000373 TF CHIP-LexA-16264194 LexA 1.39 polA nd nd nd nd 16264194


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