RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress potI 892545 893302 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress artI 902486 903535 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress mukE 974581 975242 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D ycbU 1001899 1002373 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress gltD 3351558 3353088 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress argR 3382025 3383165 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress mreB 3399309 3399796 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress argD 3487484 3489076 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress trpS 3517075 3517436 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress dam 3517075 3517436 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress waaG 3806181 3806636 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress atpG 3920501 3920987 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress atpH 3920501 3920987 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress atpI 3920501 3920987 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D yeaJ 1869594 1870014 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D ND 1952824 1953136 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisA 2087577 2088482 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisP 2424585 2425181 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress purF 2428194 2429656 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D yffL 2557082 2559148 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce eutP 2573806 2574146 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce dapE 2588995 2589518 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress carA 28308 30739 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress crl 257351 257712 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D yahA 330578 331196 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D dtpD 741052 742995 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress potF 892545 893302 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress trxB 931353 931949 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress mukB 974581 975242 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D narL 1275381 1275812 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce puuE 1362134 1362377 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D ydeN 1580644 1581171 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress pyrL 4469779 4471687 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress argI 4475136 4477553 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress gph 3517075 3517436 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress rpe 3517075 3517436 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress damX 3517075 3517436 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress waaJ 3806181 3806636 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress atpC 3920501 3920987 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress argB 4151441 4153325 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress argH 4151441 4153325 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce phnP 4314038 4314474 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce phnN 4314038 4314474 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisG 2087577 2088482 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisH 2087577 2088482 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce galS 2239921 2240176 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress yfcC 2414703 2415462 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisJ 2424585 2425181 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce eutQ 2573806 2574146 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress stpA 2796033 2798011 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress rpsO 3315468 3317714 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce astA 1830101 1830413 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce astC 1830101 1830413 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D yeaL 1872084 1872461 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisL 2087577 2088482 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisC 2087577 2088482 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisF 2087577 2088482 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisI 2087577 2088482 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress ubiX 2428194 2429656 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress cvpA 2428194 2429656 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce eutD 2573806 2574146 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce eutS 2573806 2574146 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D hcaT 2665690 2666223 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce plsC 3161466 3161815 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D yraQ 3295706 3296705 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress rbfA 3315468 3317714 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress infB 3315468 3317714 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress rimP 3315468 3317714 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress metY 3315468 3317714 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress glmM 3322077 3322608 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress gltB 3351558 3353088 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress mreD 3399309 3399796 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress mreC 3399309 3399796 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress waaP 3806181 3806636 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress waaQ 3806181 3806636 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress atpD 3920501 3920987 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress atpF 3920501 3920987 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress atpE 3920501 3920987 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress argC 4151441 4153325 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress argF 288475 289980 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress potG 892545 893302 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress artM 902486 903535 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress artQ 902486 903535 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress ybjE 913880 914239 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress lrp 931353 931949 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D ycbW 1004899 1005217 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce astE 1830101 1830413 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress carB 28308 30739 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress ftsZ 105122 105702 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce aroP 120847 122747 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D ycfD 1187287 1187861 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress pfkB 1804072 1804377 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D yoaI 1872084 1872461 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisB 2087577 2088482 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisM 2424585 2425181 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce eutM 2573806 2574146 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce eutT 2573806 2574146 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress yqaE 2795069 2795643 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress pnp 3315468 3317714 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress truB 3315468 3317714 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress gltF 3351558 3353088 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress aroB 3517075 3517436 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress aroK 3517075 3517436 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress rfaZ 3806181 3806636 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce phnO 4314038 4314474 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress pyrB 4469779 4471687 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce yaaU 45528 45989 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce ykgA 315843 316505 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress dps 847925 848924 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress dacC 879759 880172 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress potH 892545 893302 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress artJ 899020 900878 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress artP 902486 903535 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D ycbV 1001899 1002373 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D ycbF 1001899 1002373 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce puuB 1362134 1362377 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress isrA 1403170 1403618 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress ydgI 1677155 1677929 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress folM 1677155 1677929 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce astB 1830101 1830413 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress nusA 3315468 3317714 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress argG 3315468 3317714 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress waaK 3806181 3806636 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress waaY 3806181 3806636 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress waaI 3806181 3806636 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress waaB 3806181 3806636 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress rfaS 3806181 3806636 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress atpA 3920501 3920987 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress atpB 3920501 3920987 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress argE 4151441 4153325 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce gltP 4292093 4292548 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress pyrI 4469779 4471687 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce astD 1830101 1830413 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hchA 2033481 2033774 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D asnT 2041989 2042588 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR N/D yoeI 2085011 2085848 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisD 2087577 2088482 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress hisQ 2424585 2425181 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce yffB 2588995 2589518 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR induce ypfN 2588995 2589518 nd CHIP, MSI 22082910
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 ArgR repress argA 2946076 2948463 nd CHIP, MSI 22082910


RegulonDB