RegulonDB RegulonDB 10.5: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd ompF nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd aroP nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd acrA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX-OmpR-26332955 OmpR nd micF nd nd nd nd 26332955
  HTRI00000380 TF gSELEX-OmpR-26332955 OmpR nd yhcA nd nd nd nd 26332955
  HTRI00000380 TF GEA-OmpR-26332955 OmpR induce ompR nd nd nd nd 26332955
  HTRI00000380 TF GEA-OmpR-26332955 OmpR induce uvrY nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd nudF nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd csgD nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd fadL nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd creA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd yccT nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd insA-7 nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd nudF nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd cstA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd fadL nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd tppB nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd yccT nd nd nd nd 26332955
  HTRI00000380 TF gSELEX-OmpR-26332955 OmpR nd dtpA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX-OmpR-26332955 OmpR nd essD nd nd nd nd 26332955
  HTRI00000380 TF gSELEX-OmpR-26332955 OmpR nd hchA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd insA-7 nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd ppiA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd yccU nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd csgD nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd ompF nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd aroP nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd fecI nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd ugpB nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd cstA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd tppB nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd yedS nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd ugpB nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd creA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd yedS nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd ppiA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd yccU nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd yfcZ nd nd nd nd 26332955
  HTRI00000380 TF gSELEX-OmpR-26332955 OmpR nd nmpC nd nd nd nd 26332955
  HTRI00000380 TF gSELEX-OmpR-26332955 OmpR nd ompC nd nd nd nd 26332955
  HTRI00000380 TF GEA-OmpR-26332955 OmpR induce stpA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd cyoA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd csgB nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd acrA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd yfcZ nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd cyoA nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd fecI nd nd nd nd 26332955
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 OmpR nd csgB nd nd nd nd 26332955


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