RegulonDB RegulonDB 10.5: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd yddW nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd yhjR/yhjS nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd gltX/valU nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd kbl nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd trkG nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd carAB nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd fdoG/fdhD nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd htrE nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd sdaC nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd slp nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd yagB nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd yffQ nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd yfjM/yfjN nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP induce ygjG/aer nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd feoA nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd ybcL nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd ybeW nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd aefA nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd dgoK nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd ileS nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP induce mglA nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd treR/mgtA nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd xasA nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd yccZ nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd ycjM nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd yiaH/glyQ nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd yjbB nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd ascG/ascF nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd cmtB nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd gnd nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd hemB/yaiT nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd hlpA nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd hsdR/mrr nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd livK/yhhK nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP induce marC/marR nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd pntA/ydgH nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd ybjJ nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd yjfP/yjfO nd nd nd CHIP, AIBSCS 16301522
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CRP nd ykgK/L nd nd nd CHIP, AIBSCS 16301522


RegulonDB