RegulonDB RegulonDB 10.5: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress trpC 1320852 1321539 nd nd 22082910
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress aroH 1785847 1786671 nd nd 22082910
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress trpL 1320852 1321539 nd nd 22082910
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress trpD 1320852 1321539 nd nd 22082910
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress trpA 1320852 1321539 nd nd 22082910
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress trpB 1320852 1321539 nd nd 22082910
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress aroM 405218 405704 nd nd 22082910
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress trpR 4630312 4631023 nd nd 22082910
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress mtr 3303034 3304695 nd nd 22082910
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress trpE 1320852 1321539 nd nd 22082910
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress aroL 405218 405704 nd nd 22082910
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 TrpR repress yaiA 405218 405704 nd nd 22082910


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