RegulonDB RegulonDB 10.5: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd dsbG 638054 638085 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce dps 848172 848204 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce znuCB 1940614 1940647 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR repress flu 2069353 2069385 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce mntH 2510814 2510846 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd soxR 4275426 4275458 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd fhuF 4603705 4603737 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce ahpCF 637846 637876 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR repress ybjM 889065 889097 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd clpS 922071 922103 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce metE 4010849 4010881 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd sodA 4098776 4098808 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce katG 4131747 4131779 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd oxyS 4156398 4156430 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd oxyR 4156469 4156501 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd soxS 4275426 4275458 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce yjjZ 4603722 4603754 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd uof-fur 710134 710167 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce znuA-mepM 1940614 1940647 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce zinT 2039376 2039407 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce trxC 2716617 2716649 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce ahpCF 638092 638124 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR repress ybjC-nfsA 890049 890082 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce sufABCDSE 1762662 1762694 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR repress flu 2069299 2069331 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd yhjB 3670305 3670337 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce metR 4010849 4010881 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce katG 4131821 4131853 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd uof-fur 710031 710063 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR induce grxA 889975 890007 nd nd 26279566
  HTRI00000459 TF CHIP-SV, MSI-OxyR-26279566 OxyR nd yhjA 3667355 3667387 nd nd 26279566


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