RegulonDB RegulonDB 10.5: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd gadW 3664826 3664846 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd gadA 3667657 3667677 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd gadA 3667717 3667737 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd proP 4330507 4330527 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd ydeN 1582655 1582675 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd ydhR 1746634 1746654 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd 3ETSleuZ 1991782 1991802 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd rplF 3446058 3446078 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd livK 3597877 3597897 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd yhiS_1 3651151 3651171 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd lpxC 106536 106556 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd cueR 513750 513770 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd gadB 1572231 1572251 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd ydeN 1582832 1582852 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd 3ETSleuZ 1991791 1991811 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd yeeO 2059763 2059783 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd yqeK 2990565 2990585 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd sibD 3194787 3194807 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd arrS 3658142 3658162 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd gadX 3665722 3665742 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd cspA 3719948 3719968 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd yjeV 4392730 4392750 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd yhiS_2 3653315 3653335 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd hdeA 3656909 3656929 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd dppA 3707952 3707972 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd ynfA 1655715 1655735 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd nuoA 2405051 2405071 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd rrsG 2731455 2731475 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd livK 3597712 3597732 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd thrW 262964 262984 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd waaZ 3800115 3800135 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd yieP 3941489 3941509 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd rplL 4180524 4180544 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd gadB 1572291 1572311 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd yfgG 2629242 2629262 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd ygeG 2990934 2990954 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd ygeG 2990940 2990960 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd ibsC 3057050 3057070 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd yrbN 3307993 3308013 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd rpmJ 3442664 3442684 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd bfr 3466960 3466980 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd lysQ 781551 781571 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd wbbI 2106381 2106401 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd rseA 2709776 2709796 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd rpoS 2867801 2867821 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd yqeK 2990516 2990536 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd yrdD 3431847 3431867 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd slp 3653843 3653863 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd slp 3653895 3653915 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd slp 3653948 3653968 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd hdeA 3656833 3656853 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd gadW 3664642 3664662 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd gadX 3665993 3666013 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd mutM 3811496 3811516 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd rrsA 4035212 4035232 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd rrsB 4166315 4166335 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd tufB 4175681 4175701 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd lysC 4233092 4233112 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd leuL 83705 83725 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd aspV 237016 237036 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd appC 1037679 1037699 nd nd 26258987
  HTRI00000831 TF ChIP-exo|RSATgadX.all.regulon26258987 GadX nd gadB 1572076 1572096 nd nd 26258987


RegulonDB