RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.


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  ID Type Name|Title Evidence Method Reference
  HTRI00000005 TF Microarray-ArcA-24699140 Microarray nd 24699140
  HTRI00000006 TF Microarray-Fnr-24699140 Microarray nd 24699140
  HTRI00000007 TF Microarray-Lrp-19052235 Microarray nd 19052235
  HTRI00000008 TF RNA-seq-Fur-25222563 RNA-seq nd 25222563
  HTRI00000009 TF RNA-seq-OmpR-28526842 RNA-seq nd 28526842
  HTRI00000081 TF gSELEX-CsgD-21421764 gSELEX nd 21421764
  HTRI00000082 TF gSELEX-DpiA-18997424 gSELEX nd 18997424
  HTRI00000083 TF CHIP-Fis-16963779 CHIP nd 16963779
  HTRI00000087 TF CHIP-FNR-17164287 CHIP nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 CHIP-SV nd 17164287
  HTRI00000169 TF gSELEX, AIBSCS-CRP-21673794 gSELEX, AIBSCS nd 21673794
  HTRI00000173 TF gSELEX-H-NS-21883529 gSELEX nd 21883529
  HTRI00000174 TF gSELEX, GEA, CV(GEA/gSELEX)-H-NS-21883529 gSELEX, GEA, CV(GEA/gSELEX) nd 21883529
  HTRI00000175 TF gSELEX, GEA, CV(GEA/gSELEX)-H-NS-21883529 gSELEX, GEA, CV(GEA/gSELEX) nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 gSELEX nd 21883529
  HTRI00000178 TF gSELEX, GEA, CV(GEA/gSELEX)-LeuO-21883529 gSELEX, GEA, CV(GEA/gSELEX) nd 21883529
  HTRI00000179 TF gSELEX, GEA, CV(GEA/gSELEX)-LeuO-21883529 gSELEX, GEA, CV(GEA/gSELEX) nd 21883529
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 CHIP-SV, MSI nd 26258987
  HTRI00000181 TF CHIP-SV, MSI-GadW-26258987 CHIP-SV, MSI nd 26258987
  HTRI00000182 TF CHIP-SV, MSI-GadX-26258987 CHIP-SV, MSI nd 26258987
  HTRI00000183 TF CHIP-SV, MSI-OxyR-26279567 CHIP-SV, MSI nd 26279567
  HTRI00000184 TF CHIP-SV, MSI-OxyR-26279568 CHIP-SV, MSI nd 26279568
  HTRI00000185 TF CHIP-SV, MSI-OxyR-26279569 CHIP-SV, MSI nd 26279569
  HTRI00000186 TF CHIP-SV, MSI-OxyR-26279570 CHIP-SV, MSI nd 26279570
  HTRI00000187 TF CHIP-SV, MSI-OxyR-26279571 CHIP-SV, MSI nd 26279571
  HTRI00000188 TF CHIP-SV, MSI-OxyR-26279572 CHIP-SV, MSI nd 26279572
  HTRI00000189 TF CHIP-SV, MSI-OxyR-26279573 CHIP-SV, MSI nd 26279573
  HTRI00000190 TF CHIP-SV, MSI-OxyR-26279574 CHIP-SV, MSI nd 26279574
  HTRI00000191 TF CHIP-SV, MSI-OxyR-26279575 CHIP-SV, MSI nd 26279575
  HTRI00000192 TF CHIP-SV, MSI-OxyR-26279576 CHIP-SV, MSI nd 26279576
  HTRI00000193 TF CHIP-SV, MSI-OxyR-26279577 CHIP-SV, MSI nd 26279577
  HTRI00000194 TF CHIP-SV, MSI-OxyR-26279578 CHIP-SV, MSI nd 26279578
  HTRI00000195 TF CHIP-SV, MSI-OxyR-26279579 CHIP-SV, MSI nd 26279579
  HTRI00000196 TF CHIP-SV, MSI-OxyR-26279580 CHIP-SV, MSI nd 26279580
  HTRI00000197 TF CHIP-SV, MSI-OxyR-26279581 CHIP-SV, MSI nd 26279581
  HTRI00000198 TF CHIP-SV, MSI-OxyR-26279582 CHIP-SV, MSI nd 26279582
  HTRI00000199 TF CHIP-SV, MSI-OxyR-26279583 CHIP-SV, MSI nd 26279583
  HTRI00000200 TF CHIP-SV, MSI-OxyR-26279584 CHIP-SV, MSI nd 26279584
  HTRI00000201 TF CHIP-SV, MSI-OxyR-26279585 CHIP-SV, MSI nd 26279585
  HTRI00000202 TF CHIP-SV, MSI-OxyR-26279586 CHIP-SV, MSI nd 26279586
  HTRI00000203 TF CHIP-SV, MSI-OxyR-26279587 CHIP-SV, MSI nd 26279587
  HTRI00000204 TF CHIP-SV, MSI-OxyR-26279588 CHIP-SV, MSI nd 26279588
  HTRI00000205 TF CHIP-SV, MSI-OxyR-26279589 CHIP-SV, MSI nd 26279589
  HTRI00000206 TF CHIP-SV, MSI-OxyR-26279590 CHIP-SV, MSI nd 26279590
  HTRI00000207 TF CHIP-SV, MSI-OxyR-26279591 CHIP-SV, MSI nd 26279591
  HTRI00000208 TF CHIP-SV, MSI-OxyR-26279592 CHIP-SV, MSI nd 26279592
  HTRI00000209 TF CHIP-SV, MSI-OxyR-26279593 CHIP-SV, MSI nd 26279593
  HTRI00000210 TF CHIP-SV, MSI-OxyR-26279594 CHIP-SV, MSI nd 26279594
  HTRI00000211 TF CHIP-SV, MSI-OxyR-26279595 CHIP-SV, MSI nd 26279595
  HTRI00000212 TF CHIP-SV, MSI-OxyR-26279596 CHIP-SV, MSI nd 26279596
  HTRI00000213 TF CHIP-SV, MSI-OxyR-26279597 CHIP-SV, MSI nd 26279597
  HTRI00000214 TF CHIP-SV, MSI-SoxR-26279566 CHIP-SV, MSI nd 26279566
  HTRI00000215 TF CHIP-SV, MSI-SoxR-26279567 CHIP-SV, MSI nd 26279567
  HTRI00000216 TF CHIP-SV, MSI-SoxR-26279568 CHIP-SV, MSI nd 26279568
  HTRI00000217 TF CHIP-SV, MSI-SoxR-26279569 CHIP-SV, MSI nd 26279569
  HTRI00000218 TF CHIP-SV, MSI-SoxR-26279570 CHIP-SV, MSI nd 26279570
  HTRI00000219 TF CHIP-SV, MSI-SoxR-26279571 CHIP-SV, MSI nd 26279571
  HTRI00000220 TF CHIP-SV, MSI-SoxR-26279572 CHIP-SV, MSI nd 26279572
  HTRI00000221 TF CHIP-SV, MSI-SoxR-26279573 CHIP-SV, MSI nd 26279573
  HTRI00000222 TF CHIP-SV, MSI-SoxR-26279574 CHIP-SV, MSI nd 26279574
  HTRI00000223 TF CHIP-SV, MSI-SoxR-26279575 CHIP-SV, MSI nd 26279575
  HTRI00000224 TF CHIP-SV, MSI-SoxS-26279566 CHIP-SV, MSI nd 26279566
  HTRI00000225 TSS RNA-seq-High_throughput_transcription_initiation_mapping_with_5_tri_or_monophosphate_enrichment-19838305 RNA-seq nd 19838305
  HTRI00000226 TSS RNA-seq-StorzG_TSS_Table_LB-25266388 RNA-seq nd 19838305
  HTRI00000227 TSS RNA-seq-StorzG_TSS_Table_LB_2.0-25266388 RNA-seq nd 19838305
  HTRI00000228 TSS RNA-seqStorzG_TSS_Table_M6325266388 RNA-seq nd 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 RNA-seq nd 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 RNA-seq nd 19838305
  HTRI00000232 TF Microarray-ArgR-22082910 Microarray Microarray 22082910
  HTRI00000233 TF CHIP-Fur-26670385 CHIP nd 26670385
  HTRI00000234 TF CHIP-H-NS-16963779 CHIP nd 16963779
  HTRI00000235 TF CHIP-IHF-16963779 CHIP nd 16963779
  HTRI00000323 TF gSELEX-LeuO-19429622 gSELEX nd 19429622
  HTRI00000328 TF gSELEX-Lrp-28348809 gSELEX nd 28348809
  HTRI00000331 TF gSELEX-NemR-18567656 gSELEX nd 18567656
  HTRI00000332 TF CHIP-NsrR-19656291 CHIP nd 19656291
  HTRI00000333 TF CHIP-SV-NsrR-19656291 CHIP-SV nd 19656291
  HTRI00000335 TF gSELEX-OmpR-26332955 gSELEX nd 26332955
  HTRI00000336 TF GEA-OmpR-26332955 GEA nd 26332955
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 MEME Suite 4.10.1 nd 28061857
  HTRI00000338 TF gSELEX-PdhR-17513468 gSELEX nd 17513468
  HTRI00000339 TF gSELEX-PgrR-23301696 gSELEX nd 23301696
  HTRI00000340 TF CHIP-PurR-21572102 CHIP nd 21572102
  HTRI00000342 TF --21572102 nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 CHIP-SV nd 21572102
  HTRI00000344 TF gSELEX-RcdA-23233451 gSELEX nd 23233451
  HTRI00000345 TF CHIP-RutR-18515344 CHIP nd 18515344
  HTRI00000346 TF CHIP-SVRutR18515344 CHIP-SV nd 18515344
  HTRI00000347 TF gSELEX-RutR-17919280 gSELEX nd 17919280
  HTRI00000348 TF gSELEX-SdiA-24645791 gSELEX nd 24645791
  HTRI00000349 TF gSELEX-RstA-17468243 gSELEX nd 17468243
  HTRI00000351 TF gSELEX-SutR-25406449 gSELEX nd 25406449
  HTRI00000362 TF CHIP-TrpR-22082910 CHIP nd 22082910
  HTRI00000366 TF gSELEX-Dan-20156994 gSELEX nd 20156994
  HTRI00000367 TF CHIP-Sigma32-16892065 CHIP nd 16892065
  HTRI00000368 TF CHIP-Sigma38-26020590 CHIP nd 26020590
  HTRI00000371 TF CHIP-Sigma70-16301522 CHIP nd 16301522
  HTRI00000373 TF CHIP-LexA-16264194 CHIP nd 16264194
  HTRI00000376 TF CHIP-SV-ArgR-22082910 CHIP-SV nd 22082910
  HTRI00000377 TF gSELEX-AscG-19633077 gSELEX nd 19633077
  HTRI00000379 TF CHIP, MSI-ArgR-22082910 CHIP, MSI CHIP, MSI 22082910
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 gSELEX, AIBSCS nd 26332955
  HTRI00000381 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000382 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000383 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000384 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000385 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000386 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000387 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000388 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000389 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000390 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000391 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000392 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000393 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000394 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000395 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000396 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000397 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000398 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000399 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000400 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000401 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000402 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000403 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000404 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000405 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000406 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000407 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000408 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000409 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000410 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000411 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000412 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000413 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000414 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000415 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000416 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000417 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000418 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000419 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000420 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000421 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000422 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000423 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000424 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000425 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000426 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000427 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000428 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000429 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000430 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000431 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000432 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000433 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000434 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000435 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000436 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000437 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000438 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000439 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000440 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000441 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000442 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000443 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000445 TF gSELEX-BasR-22442305 gSELEX nd 22442305
  HTRI00000446 TF gSELEX-CitB (dpiA)-18997424 gSELEX nd 18997424
  HTRI00000447 TF gSELEX-Cra-16115199 gSELEX nd 16115199
  HTRI00000448 TF gSELEX-Cra-21115656 gSELEX nd 21115656
  HTRI00000449 TF CHIP, AIBSCS-CRP-16301522 CHIP, AIBSCS CHIP, AIBSCS 16301522
  HTRI00000450 TF CHIP, MSI-fnr-23818864 CHIP, MSI nd 23818864
  HTRI00000451 TF CHIP, AIBSCS-LexA-16264194 CHIP, AIBSCS nd 16264194
  HTRI00000452 TF gSELEX, AIBSCS-MntR-21239586 gSELEX, AIBSCS nd 21239586
  HTRI00000453 TF gSELEX, AIBSCS-RstA-17468243 gSELEX, AIBSCS nd 17468243
  HTRI00000454 TF gSELEX, MSI-SutR-25406449 gSELEX, MSI nd 25406449
  HTRI00000455 TF CHIP, MSI-TrpR-22082910 CHIP, MSI nd 22082910
  HTRI00000456 TF CHIP-Sigma32-16818608, 20602746 CHIP nd 16818608
  HTRI00000457 TF CHIP, MSI-Sigma70-23818864 CHIP, MSI nd 23818864
  TSS RNA-seq-StorzG_TSS_Table_LB_2.0-25266388 RNA-seq nd 19838305


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