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Name: | agaR | |||||||||
Gene(s): | agaR Genome Browser M3D Gene expression COLOMBOS | |||||||||
Evidence: | [AISGDTU] Automated inference that a single-gene directon is a transcription unit | |||||||||
Promoter | ||||||||||
Name: | agaRp | |||||||||
+1: | 3278703 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 38 | |||||||||
Sequence: |
agcttgcgtcaatgggcaaggtgggcttgcatttgcttaatagaaaggcgttaataggcaAaacgaaatgaaacgaaagtt -35 -10 +1 |
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Evidence: |
[HIPP] [ICWHO] [TIM] |
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Reference(s): |
[1] Huerta AM., et al., 2003 [2] Ray WK., et al., 2004 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | AgaR | repressor | agaRp | 3278686 | 3278705 | 8.5 | cgttaataggCAAAACGAAATGAAACGAAAgttttacgaa | nd | [GEA], [APIORCISFBSCS], [BPP] | [2] |
proximal | AgaR | repressor | agaRp | 3278713 | 3278732 | -19.5 | tgggcttgcaTTTGCTTAATAGAAAGGCGTtaataggcaa | nd | [GEA], [APIORCISFBSCS], [BPP] | [2] |
Reference(s) |
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