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Name: | trg |
Gene(s): | trg Genome Browser M3D Gene expression COLOMBOS |
Note(s): | The trgp1 and aerp promoters are the only Escherichia coli σ28 promoters that are activated by CRP Hollands K,2010 |
Evidence: | [IC] Inferred by curator |
Promoter | |
Name: | trgp1 |
+1: | 1492439 |
Sigma Factor: | Sigma28 Sigmulon |
Distance from start of the gene: | 31 |
Sequence: |
tgtgacgcaaagaggtttttggtcataagtaattaccgtcaagtgccgatgactttctatCaggagtaaacctggacgaga -35 -10 +1 |
Note(s): | The trg promoter is the only Escherichia coli σ28 promoter that is activated by CRP Hollands K,2010 |
Evidence: |
[HIPP] [HTIM] |
Reference(s): |
[1] Helmann JD., et al., 1987 [2] Mendoza-Vargas A., et al., 2009 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
remote | Fis | activator | trgp1 | 1492283 | 1492297 | -149.0 | gtgctgttttCCAGAATTTTTCGTCattcgggtta | nd | [AIBSCS], [CV(GEA)], [GEA] | [3] |
proximal | Fis | activator | trgp1 | 1492372 | 1492386 | -60.0 | aataattgttGTAAAAATGTGACGCaaagaggttt | nd | [AIBSCS], [CV(GEA)], [GEA] | [3] |
Reference(s) |
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