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Name: | metNIQ |
Synonym(s): | abc |
Gene(s): | metQ, metI, metN Genome Browser M3D Gene expression COLOMBOS |
Note(s): | A potential RNA G-quadruplex structure, formed by guanine-rich sequences located in the coding sequence region of the gene, was identified for metQ . This structure could regulate the expression of the gene, as observed for hemL gene expression 31964733. |
Evidence: | [IEP] Inferred from expression pattern [ITC] Inferred through co-regulation |
Reference(s): | [1] Merlin C., et al., 2002 |
Promoter | |
Name: | metNp |
+1: | 222714 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 69 |
Sequence: |
aaagtgctcttcgcataaacctgattgatttagacgtctggatgccttaacatccatttcAttgacggcgttgcccgtttc -35 -10 +1 |
Evidence: |
[HIPP] [ICA] [RS-EPT-CBR] |
Reference(s): |
[2] Gal J., et al., 2002 [3] Salgado H, et al., 2012 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | MetJ-S-adenosylmethionine | repressor | metNp | 222724 | 222739 | -17.5 | tgatttagacGTCTGGATGCCTTAACatccatttca | nd | [AIBSCS], [CV(GEA)], [GEA] | [2], [4], [5] |
proximal | MetJ-S-adenosylmethionine | repressor | metNp | 222732 | 222747 | -25.5 | aacctgattgATTTAGACGTCTGGATgccttaacat | nd | [AIBSCS], [APIORCISFBSCS] | [1], [2], [4], [5] |
Reference(s) |
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