RegulonDB RegulonDB 10.8: Operon Form
   

cueO operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: cueO
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: cueO
Gene(s): cueO   Genome Browser M3D Gene expression COLOMBOS
Promoter
Name: cueOp
+1: 137045
Distance from start of the gene: 38
Sequence: tcgattaaattgtgtctgcggcttgaccttcccgtaaggggaaggactatgctcaacgttTgattttgtttcgcctgctta
Note(s): This promoter has a putative transcription start site.
Evidence: [HIPP]
[RS-EPT-CBR]
Reference(s): [1] Outten FW., et al., 2000
[2] Salgado H, et al., 2012
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CueR-Cu+1 activator cueOp 137020 137019 -25.0 nd nd [APIORCISFBSCS], [BPP], [CV(CHIP-SV/GEA/ROMA)], [CV(GEA/ROMA)], [GEA] [1], [3], [4]
Note(s): 1The presence of Fe(III) provokes the dissociation of CueR from the DNA binding site upstream of cueO Xu Z,2019.1The presence of Fe(III) provokes the dissociation of CueR from the DNA binding site upstream of cueO Xu Z,2019.


Regulation by sRNA    
  Small RNA name (Regulator) Regulation type Mechanism Function Binding Sites Evidence Reference
LeftPos RightPos Sequence (RNA-strand)
  ryhB antisense post-transcriptional regulation repressor       [IMP] [5]
Notes: "The provided sequence is that of the RNA strand,i.e. 'U's are showed instead the 'T'"





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