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Name: | nac |
Gene(s): | nac Genome Browser M3D Gene expression COLOMBOS |
Note(s): | The transcription of the nac gene is induced under nitrogen-limiting conditions Camarena L,1998. Under nitrogen-rich growth conditions, the expression of the nac gene was increased in mutants for two genes that encode two terminal oxidases, cyoA and cydB, and in mutants for two transcriptional regulators, Fnr and Fur Kumar R,2011 |
Evidence: | [LTED] Length of transcript experimentally determined |
Reference(s): | [1] Camarena L., et al., 1998 |
Promoter | |
Name: | nacp |
+1: | 2061978 |
Sigma Factor: | Sigma54 Sigmulon |
Distance from start of the gene: | 45 |
Sequence: |
ttggttagcttgtacatcaacaccaaaataaaactggcaagcatcttgcaatctggttgtAagtaatggcggcacttgggc -24 -12 +1 |
Evidence: |
[HIPP] [TIM] |
Reference(s): | [2] Muse WB., et al., 1998 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | Nac | repressor | nacp | 2062046 | 2062060 | -75.0 | tgacgaatctATCATAATCTCTTATttgacagttg | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [2] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
remote | NtrC-Pasp | activator | nacp | 2062122 | 2062138 | -152.0 | tattgggtaaTGAACCATCGTGGTGCAtaccctcctt | nd | [APIORCISFBSCS] | [2] |
Reference(s) |
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