Name: |
zraSR |
Synonym(s): |
hydHG |
Gene(s): |
zraS, zraR
Genome Browser
M3D Gene expression
COLOMBOS
|
Evidence: |
[IEP] Inferred from expression pattern [ITCR] Inferred through co-regulation |
Reference(s): |
[1] Stoker K., et al., 1989
|
Promoter |
|
Name: |
zraSp |
+1: |
4201905 |
Sigma Factor: |
Sigma54 Sigmulon |
Distance from start of the gene: |
21
|
Sequence: |
tgtgttacagcgcagggtaagcgctgataaaagatggcatgatttctgctgtcagaaaggGatgagcaggcaaagaagaag -24 -12 +1
|
Note(s): |
We assigned a putative transcription start site to this promoter based on the observation that the majority of the σ54-dependent promoters, whose transcription start sites were determined experimentally, present a distance of 11 nucleotides between the transcription start site and the -12 box Barrios H,1999. |
Evidence: |
[AIBSCS] [AIPP] [HIPP] [ICWHO]
|
Reference(s): |
[2] Huerta AM., et al., 2003 [3] Leonhartsberger S., et al., 2001 [4] Reitzer L., et al., 2001
|
Transcription factor |
Function |
Promoter |
Binding Sites |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
LeftPos |
RightPos |
Central Rel-Pos |
Sequence |
CRP-cyclic-AMP |
activator |
zraSp |
4201671
|
4201692
|
-223.5
|
ccagggcaatTTTCGTGTTCCGTTTCATGGTTaatcctccag
|
[GEA]
|
[5]
|
ZraR-phosphorylated |
activator |
zraSp |
4201782
|
4201798
|
-115.0
|
catgataaacGAGTAAAAATGACTCGCctgctgcggg
|
[APIORCISFBSCS], [BPP], [GEA]
|
[3]
|
ZraR-phosphorylated |
activator |
zraSp |
4201811
|
4201827
|
-86.0
|
gctgcgggtaGCGAGTCATTTTTACTCattgaaactt
|
[GEA]
|
[3]
|