RegulonDB RegulonDB 10.8: Operon Form
   

asnT operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: asnT
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: asnT
Gene(s): asnT   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
[LTED] Length of transcript experimentally determined
Reference(s): [1] Ow MC., et al., 2002
Promoter
Name: asnTp
+1: 2044541
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 8
Sequence: aatgacttatgaaatttagtgttgacagacaaggtaccgctaagtaatattcgccccgttCacacgattcctctgtagttc
                      -35                       -10         +1                   
Evidence: [HIPP]
Terminator(s)
Type: rho-independent
Sequence: cgggtttttaACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGaacgccatca
Reference(s): [2] Peters JM., et al., 2009
[3] Zuker M. 2003


Evidence    

 [HIPP] Human inference of promoter position


Reference(s)    

 [1] Ow MC., Kushner SR., 2002, Initiation of tRNA maturation by RNase E is essential for cell viability in E. coli., Genes Dev 16(9):1102-15

 [2] Peters JM., Mooney RA., Kuan PF., Rowland JL., Keles S., Landick R., 2009, Rho directs widespread termination of intragenic and stable RNA transcription., Proc Natl Acad Sci U S A 106(36):15406-11

 [3] Zuker M., 2003, Mfold web server for nucleic acid folding and hybridization prediction., Nucleic Acids Res 31(13):3406-15

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