RegulonDB RegulonDB 11.1: Operon Form

pheV operon and associated TUs in Escherichia coli K-12 genome

Name: pheV
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: pheV
Gene(s): pheV   Genome Browser M3D Gene expression COLOMBOS
Evidence: [EXP-IDA-BOUNDARIES-DEFINED] Boundaries of transcription experimentally identified
[EXP-IDA-TRANSCRIPT-LEN-DETERMINATION] Length of transcript experimentally determined
Reference(s): [1] Ow MC., et al., 2002
Name: pheVp
+1: 3110365
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 1
Sequence: gcagtaaattgaagaaatttgattgacgagacgaggcgaatcaggtttaatgcgccccgtTgcccggatagctcagtcggt
                       -35                      -10         +1                   
Evidence: [COMP-AINF]
Reference(s): [2] Huerta AM., et al., 2003
Type: rho-independent
Reference(s): [3] Caillet J., et al., 1985
[4] Peters JM., et al., 2009
[5] Zuker M. 2003
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal Fis activator pheVp 3110283 3110297 -75.0 tatcggcaaaGTGATGATAGATTGTgcagtctgca nd [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] nd nd