RegulonDB RegulonDB 11.1: Operon Form

msrA operon and associated TUs in Escherichia coli K-12 genome

Name: msrA
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: msrA
Gene(s): msrA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [EXP-IDA-TRANSCRIPT-LEN-DETERMINATION] Length of transcript experimentally determined
Reference(s): [1] Moskovitz J., et al., 1995
Name: msrAp
+1: 4442261
Distance from start of the gene: 85
Sequence: atccagtaatatggattaaaaagcagactaaaccccaaatatttcttatgttttactttaGacctattcacggtggttatt
Reference(s): [1] Moskovitz J., et al., 1995
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal Fis repressor msrAp 4442256 4442275 -4.0 aaatatttctTATGTTTTACTTTAGACCTAttcacggtgg nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] W [2]
proximal Fis repressor msrAp 4442292 4442311 -40.0 atccagtaatATGGATTAAAAAGCAGACTAaaccccaaat nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] W [2]