RegulonDB RegulonDB 10.8: Operon Form
   

nmpC operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: nmpC
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: nmpC
Synonym(s): lc, phmA, phmA/nmpC
Gene(s): nmpC   Genome Browser M3D Gene expression COLOMBOS
Note(s): Based on microarray and RT-qPCR analyses, it was determined that the yebF and nmpC genes are up- and downregulated, respectively, upon exposure to glutathione (GSH) Goswami M,2018
Evidence: [LTED] Length of transcript experimentally determined
Reference(s): [1] Blasband AJ., et al., 1986
[2] Coll JL., et al., 1994
Promoter
Name: nmpCp
+1: 576870
Distance from start of the gene:
Sequence:
Evidence: [HIPP]
[TIM]
Reference(s): [1] Blasband AJ., et al., 1986
[2] Coll JL., et al., 1994
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cAMP activator nmpCp 576891 576912 -31.5 accaaaacttACATCTTGAAATAATCACATTGattagatgaa nd [APIORCISFBSCS], [SM] [2]
proximal CRP-cAMP activator nmpCp 576933 576954 -73.5 ttcagataaaAATAGAGATCTACTTCACAAATcaaacgagaa nd [APIORCISFBSCS], [SM] [2]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote IHF repressor nmpCp 577008 577020 -144.0 ataaattggcTAATAGATTTATTtttattcagc nd [APIORCISFBSCS], [SM] [2]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote MprA repressor nmpCp 577021 577041 -161.0 ttataaataaCAGCCGTTAATATAAATTGGCtaatagattt nd [AIBSCS] [3]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal OmpR-P repressor nmpCp 576906 576925 -45.5 aatcaaacgaGAAACCAAAACTTACATCTTgaaataatca nd [APIORCISFBSCS], [SM] [2]





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