RegulonDB RegulonDB 10.6.3: Operon Form
   

glpEGR operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: glpEGR
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: glpR
Gene(s): glpR   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
Reference(s): [1] Yang B., et al., 1998
[2] Zeng G., et al., 1996
Promoter
Name: glpRp2
+1: 3560756
Distance from start of the gene: 151
Sequence: ctacgtggcgaacgcgatccgcaaagtggcatttacctgcaacgtgggttaattatctttGcgctgatctggattgtcgcc
Evidence: [TIM]
Reference(s): [1] Yang B., et al., 1998
Terminator(s)
Type: rho-independent
Sequence: cagctttttgACGTTTCGCGCCAGGGCAAAGCCAGCGTCAATGACGCGGATCGGCTACGCAAATACCTGGCGCGTTTTGGTCTGACGTgggaagccgt
Reference(s): [2] Zeng G., et al., 1996


Transcription unit       
Name: glpR
Gene(s): glpR   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
Reference(s): [1] Yang B., et al., 1998
[2] Zeng G., et al., 1996
Promoter
Name: glpRp1
+1: 3560891
Distance from start of the gene: 286
Sequence: cgcctcggtagcggtaagctaattgtcattacgcttatcagcgccctgttaagcggctatGtgcagcaaaaattcagcggg
Evidence: [TIM]
Reference(s): [1] Yang B., et al., 1998
Terminator(s)
Type: rho-independent
Sequence: cagctttttgACGTTTCGCGCCAGGGCAAAGCCAGCGTCAATGACGCGGATCGGCTACGCAAATACCTGGCGCGTTTTGGTCTGACGTgggaagccgt
Reference(s): [2] Zeng G., et al., 1996


Transcription unit       
Name: glpGR
Gene(s): glpR, glpG   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
Reference(s): [1] Yang B., et al., 1998
[2] Zeng G., et al., 1996
Promoter
Name: glpGp
+1: 3561480
Distance from start of the gene: 28
Sequence: cctggcaacgtcagtttcccgcagaggtggcgtacggcgcgtaacgctttatactgtcccCttttgtgtggaataagcgac
Evidence: [TIM]
Reference(s): [1] Yang B., et al., 1998
Terminator(s)
Type: rho-independent
Sequence: cagctttttgACGTTTCGCGCCAGGGCAAAGCCAGCGTCAATGACGCGGATCGGCTACGCAAATACCTGGCGCGTTTTGGTCTGACGTgggaagccgt
Reference(s): [2] Zeng G., et al., 1996


Transcription unit          
Name: glpEGR
Gene(s): glpR, glpG, glpE   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
Reference(s): [3] Choi YL., et al., 1991
[2] Zeng G., et al., 1996
Promoter
Name: glpEp
+1: 3561849
Distance from start of the gene: 26
Sequence: atgtataacattatggcgtttatctgccgcttcgacgtaaactgtgcggtaaatttgcccActtgtttgtaaagaaagaga
Evidence: [TIM] ; Method: Primer Extension
[TIM]
Reference(s): [3] Choi YL., et al., 1991
Terminator(s)
Type: rho-independent
Sequence: cagctttttgACGTTTCGCGCCAGGGCAAAGCCAGCGTCAATGACGCGGATCGGCTACGCAAATACCTGGCGCGTTTTGGTCTGACGTgggaagccgt
Reference(s): [2] Zeng G., et al., 1996
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cAMP activator glpEp 3561897 3561918 -58.5 aaaaacatttTAGAGTGATATGTATAACATTAtggcgtttat nd [BPP], [GEA], [HIBSCS] [1], [2], [4], [5], [6]





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