RegulonDB RegulonDB 10.8: Operon Form
   

xseA operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: xseA
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: xseA
Gene(s): xseA   Genome Browser M3D Gene expression COLOMBOS
Reference(s): [1] Hutchings MI., et al., 2000
Promoter
Name: xseAp
+1: 2634197
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 35
Sequence: catctacccctttttgcaaaaaatgcttgctatccccgaagggcgggttactatcgactgAataacctgctgatttagaat
                           -35                      -10     +1                   
Evidence: [HIPP]
[RS-EPT-CBR]
Reference(s): [2] Davies IJ., et al., 1996
[3] Salgado H, et al., 2012
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cAMP repressor xseAp 2634214 2634235 28.5 tgctgatttaGAATTTGATCTCGCTCACATGTtaccttctca nd [BPP], [CV(SM)], [GEA], [SM] [1], [5]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal MarA activator xseAp 2634148 2634163 -42.0 atctacccctTTTTGCAAAAAATGCTtgctatcccc nd [BPP], [CV(GEA)], [CV(GEA)], [GEA], [ICWHO] [4]





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