RegulonDB RegulonDB 10.8: Operon Form
   

tpx operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: tpx
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: tpx
Gene(s): tpx   Genome Browser M3D Gene expression COLOMBOS
Evidence: [LTED] Length of transcript experimentally determined
Reference(s): [1] Kim HK., et al., 1996
Promoter
Name: tpxp
+1: 1388844
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 33
Sequence: ctgcggattaagcgcaaatagcgtttgctgtgttattgacagttagcataaactaggtgtGacgttaactatatgtaaaca
                         -35                     -10        +1                   
Evidence: [HIPP]
[IMP]
[TIM]
Reference(s): [1] Kim HK., et al., 1996
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal ArcA-Phosphorylated repressor tpxp 1388859 1388873 -22.0 cgtttgctgtGTTATTGACAGTTAGcataaactag nd [APIORCISFBSCS], [CV(GEA)], [GEA] [2]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal FNR repressor tpxp 1388856 1388869 -18.5 tgctgtgttaTTGACAGTTAGCATaaactaggtg nd [APIORCISFBSCS], [CV(GEA)], [GEA] [2]





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