RegulonDB RegulonDB 10.8: Operon Form
   

adiA operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: adiA
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: adiA
Gene(s): adiA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
Reference(s): [1] Stim KP., et al., 1993
Promoter
Name: adiAp
+1: 4340556
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 35
Sequence: ttcaaaaatgtttgtttttcacgcgctttacagcccgaaaaggccggaagatacttgcccGcaacgaagattccttcataa
                           -35                    -10       +1                   
Evidence: [HIPP]
[IMP]
[TIM]
Reference(s): [1] Stim KP., et al., 1993
Terminator(s)
Type: rho-independent
Sequence: aaggccaggcGGCGTAATGTTATTTAAACAATTACGCCttcagcggaa
Reference(s): [1] Stim KP., et al., 1993
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd AdiY1 activator adiAp nd nd nd nd nd [BPP], [GEA] [2], [3]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd H-NS1 repressor adiAp nd nd nd nd nd [GEA] [4]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd IHF activator adiAp nd nd nd nd nd [GEA], [SM] [3]
Note(s): 1The effect of AdiY on adiA expression is most readily detected at pH 8.0.1Hns repress adiAp promoter at pH 8.01The effect of AdiY on adiA expression is most readily detected at pH 8.0.
3Hns repress adiAp promoter at pH 8.0


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Translational
Strand: reverse
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -13.9 4340527 4340563 ccggaagataCTTGCCCGCAACGAAGATTCCTTCATAACCGGGTAAgcaatgatga
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"





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