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Name: | glpD | |||||||||
Synonym(s): | OP00038 | |||||||||
Gene(s): | glpD Genome Browser M3D Gene expression COLOMBOS | |||||||||
Reference(s): | [1] Iuchi S., et al., 1990 | |||||||||
Promoter | ||||||||||
Name: | glpDp | |||||||||
+1: | 3561971 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 42 | |||||||||
Sequence: |
tcactctaaaatgttttttcaatgttacctaaagcgcgattctttgctaatatgttcgatAacgaacatttatgagcttta -35 -10 +1 |
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Note(s): | In a gene expression analysis, RpoS positively regulated the glpD gene in the stationary phase. Its effect could be indirect Becker-Hapak M,1995 | |||||||||
Evidence: |
[ICWHO] [TIM] |
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Reference(s): |
[2] Huerta AM., et al., 2003 [3] Yang B., et al., 1996 [4] Ye SZ., et al., 1988 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | CRP-cyclic-AMP | activator | glpDp | 3561897 | 3561918 | -63.5 | ataaacgccaTAATGTTATACATATCACTCTAaaatgttttt | nd | [GEA], [APIORCISFBSCS], [BPP] | [4], [5] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | GlpR | repressor | glpDp | 3561961 | 3561980 | -0.5 | tctttgctaaTATGTTCGATAACGAACATTtatgagcttt | nd | [GEA], [APIORCISFBSCS], [BPP] | [3], [4] |
proximal | GlpR | repressor | glpDp | 3561980 | 3561999 | 19.5 | taacgaacatTTATGAGCTTTAACGAAAGTgaatgagggc | nd | [GEA], [APIORCISFBSCS], [BPP] | [3], [4] |
remote | GlpR | repressor | glpDp | 3562375 | 3562394 | 414.5 | cgggatcaacTGGTTTGCGTTTTGGCGCAAattcagtgtt | nd | [GEA], [APIORCISFBSCS], [BPP], [SM] | [3] |
remote | GlpR | repressor | glpDp | 3562416 | 3562435 | 455.5 | aaaccggaaaTTAAGCGCGGATTCGAATATtctgactgtt | nd | [GEA], [APIORCISFBSCS], [BPP], [SM] | [3] |
Reference(s) |
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