RegulonDB RegulonDB 10.6.3: Operon Form
   

metH operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: metH
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: metH
Gene(s): metH   Genome Browser M3D Gene expression COLOMBOS
Evidence: [LTED] Length of transcript experimentally determined
Reference(s): [1] Marconi R., et al., 1991
Promoter
Name: metHp2
+1: 4223505
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 323
Sequence: ggtgggtcgtggaattgggtaacccggcttgttgcgccagttccgtgagtgccacactgcCattggattcggcaatccact
                             -35                  -10       +1                   
Evidence: [TIM] ; Method: Primer Extension
[TIM]
Reference(s): [1] Marconi R., et al., 1991


Transcription unit          
Name: metH
Synonym(s): OP00055
Gene(s): metH   Genome Browser M3D Gene expression COLOMBOS
Reference(s): [2] Wehmeier UF., et al., 1992
Promoter
Name: metHp
+1: 4223783
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 45
Sequence: acaaatctcatgttgcgtggtggtcgcttttaccacagatgcgtttatgccagtatggttTgttgaatttttattaaatct
                              -35                     -10   +1                   
Evidence: [HIPP]
Reference(s): [3] Old IG., et al., 1990
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote Fur-Fe2+ repressor metHp 4223650 4223668 -124.0 ttttctgtatCGTGGAAATCATTTTCATTtttattgtta nd [AIBSCS] [4]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal MetR activator metHp 4223719 4223733 -57.0 tgagttaatgTTGAACAAATCTCATgttgcgtggt nd [GEA], [HIBSCS] [3], [5], [6], [7]





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