![]() ![]() ![]() ![]() |
Name: | ssb |
Synonym(s): | OP00091 |
Gene(s): | ssb Genome Browser M3D Gene expression COLOMBOS |
Reference(s): | [1] Schaefer TS., et al., 1991 |
Promoter | |
Name: | ssbp3 |
+1: | 4274011 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 114 |
Sequence: |
attgacctgaatgaatatacagtattggaatgcattacccggagtgttgtgtaacaatgtCtggccaggtttgtttcccgg -35 -10 +1 |
Evidence: | [TIM] |
Reference(s): |
[2] Brandsma JA., et al., 1985 [3] Ogasawara H., et al., 2005 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | ArcA-Phosphorylated | repressor | ssbp3 | 4273931 | 4273945 | -72.5 | ggcgatcacaAACGGTTAATTATGAcacaaattga | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
proximal | ArcA-Phosphorylated | repressor | ssbp3 | 4273994 | 4274008 | -9.5 | attacccggaGTGTTGTGTAACAATgtctggccag | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
remote | ArcA-Phosphorylated | repressor | ssbp3 | 4274034 | 4274048 | 31.5 | tttcccggaaCCGAGGTCACAACATagtaaaagcg | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
remote | ArcA-Phosphorylated | repressor | ssbp3 | 4274077 | 4274091 | 74.5 | aatggtacaaTCGCGCGTTTACACTtattcagaac | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | LexA | repressor | ssbp3 | 4273955 | 4273974 | -46.5 | acacaaattgACCTGAATGAATATACAGTAttggaatgca | nd | [APIORCISFBSCS], [BCE] | [2], [4] |
Name: | ssb |
Gene(s): | ssb Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [BTEI] Boundaries of transcription experimentally identified |
Reference(s): | [2] Brandsma JA., et al., 1985 |
Promoter | |
Name: | ssbp2 |
+1: | 4274080 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 45 |
Sequence: |
tttgtttcccggaaccgaggtcacaacatagtaaaagcgctattggtaatggtacaatcgCgcgtttacacttattcagaa -35 -10 +1 |
Evidence: | [TIM] |
Reference(s): |
[2] Brandsma JA., et al., 1985 [3] Ogasawara H., et al., 2005 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
remote | ArcA-Phosphorylated | repressor | ssbp2 | 4273931 | 4273945 | -141.5 | ggcgatcacaAACGGTTAATTATGAcacaaattga | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
proximal | ArcA-Phosphorylated | repressor | ssbp2 | 4273994 | 4274008 | -78.5 | attacccggaGTGTTGTGTAACAATgtctggccag | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
proximal | ArcA-Phosphorylated | repressor | ssbp2 | 4274034 | 4274048 | -38.5 | tttcccggaaCCGAGGTCACAACATagtaaaagcg | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
proximal | ArcA-Phosphorylated | repressor | ssbp2 | 4274077 | 4274091 | 5.5 | aatggtacaaTCGCGCGTTTACACTtattcagaac | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
Name: | ssb |
Gene(s): | ssb Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [BTEI] Boundaries of transcription experimentally identified |
Reference(s): | [2] Brandsma JA., et al., 1985 |
Promoter | |
Name: | ssbp1 |
+1: | 4274092 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 33 |
Sequence: |
aaccgaggtcacaacatagtaaaagcgctattggtaatggtacaatcgcgcgtttacactTattcagaacgatttttttca -35 -10 +1 |
Evidence: | [TIM] |
Reference(s): |
[2] Brandsma JA., et al., 1985 [3] Ogasawara H., et al., 2005 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
remote | ArcA-Phosphorylated | repressor | ssbp1 | 4273931 | 4273945 | -153.5 | ggcgatcacaAACGGTTAATTATGAcacaaattga | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
proximal | ArcA-Phosphorylated | repressor | ssbp1 | 4273994 | 4274008 | -90.5 | attacccggaGTGTTGTGTAACAATgtctggccag | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
proximal | ArcA-Phosphorylated | repressor | ssbp1 | 4274034 | 4274048 | -50.5 | tttcccggaaCCGAGGTCACAACATagtaaaagcg | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
proximal | ArcA-Phosphorylated | repressor | ssbp1 | 4274077 | 4274091 | -7.5 | aatggtacaaTCGCGCGTTTACACTtattcagaac | nd | [APIORCISFBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [3] |
Reference(s) |
![]() |
---|---|