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Name: | cysK |
Gene(s): | cysK Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [BTEI] Boundaries of transcription experimentally identified [IC] Inferred by curator |
Reference(s): |
[1] Byrne CR., et al., 1988 [2] Mendoza-Vargas A., et al., 2009 |
Promoter | |
Name: | cysKp2 |
+1: | 2532344 |
Distance from start of the gene: | 65 |
Sequence: |
ttattccatcttgcatgtcattatttcccttctgtatatagatatgctaaatccttacttCcgcatattctctgagcgggt |
Evidence: | [HTIM] |
Reference(s): | [2] Mendoza-Vargas A., et al., 2009 |
Terminator(s) | |
Type: | rho-independent |
Sequence: | gcgtaaaaaaGCACCTTTTTAGGTGCttttttgtgg |
Reference(s): | [1] Byrne CR., et al., 1988 |
Name: | cysK |
Synonym(s): | OP00107 |
Gene(s): | cysK Genome Browser M3D Gene expression COLOMBOS |
Note(s): | cysK expression is regulated negatively by the OmpR transcriptional regulator and is induced by CysE, an enzyme involved in the synthesis of O-acetyl-L-serine from L-serine and by addition of lithium ions 22092684. |
Evidence: | [BTEI] Boundaries of transcription experimentally identified |
Reference(s): | [1] Byrne CR., et al., 1988 |
Promoter | |
Name: | cysKp1 |
+1: | 2532377 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 32 |
Sequence: |
gtatatagatatgctaaatccttacttccgcatattctctgagcgggtatgctacctgttGtatcccaatttcatacagtt -35 -10 +1 |
Evidence: |
[CV(RS-EPT-CBR)] [CV(TIM)] [RS-EPT-CBR] [TIM] |
Reference(s): |
[1] Byrne CR., et al., 1988 [2] Mendoza-Vargas A., et al., 2009 [3] Salgado H, et al., 2012 |
Terminator(s) | |
Type: | rho-independent |
Sequence: | gcgtaaaaaaGCACCTTTTTAGGTGCttttttgtgg |
Reference(s): | [1] Byrne CR., et al., 1988 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | CysB-O-acetyl-L-serine | activator | cysKp1 | 2532277 | 2532318 | -79.0 | gtggcttatgCCGCCCCTTATTCCATCTTGCATGTCATTATTTCCCTTCTGTatatagatat | nd | [APIORCISFBSCS], [SM] | [4] |
Reference(s) |
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