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Name: | purA | |||||||||
Synonym(s): | OP00133 | |||||||||
Gene(s): | purA Genome Browser M3D Gene expression COLOMBOS | |||||||||
Note(s): | A potential RNA G-quadruplex structure, formed by guanine-rich sequences located in the coding sequence region of the gene, was identified for purA . This structure could regulate the expression of the gene, as observed for hemL gene expression Shao X, Zhang W, Umar MI, Wong HY, Seng Z, Xie Y, Zhang Y, Yang L, Kwok CK, Deng X,2020. | |||||||||
Evidence: | [LTED] Length of transcript experimentally determined | |||||||||
Reference(s): |
[1] Meng LM., et al., 1990 [2] Wolfe SA., et al., 1988 |
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Promoter | ||||||||||
Name: | purAp | |||||||||
+1: | 4404664 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 23 | |||||||||
Sequence: |
ggtcatttttgagtgcaaaaagtgctgtaactctgaaaaagcgatggtagaatccattttTaagcaaacggtgattttgaa -35 -10 +1 |
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Evidence: |
[ICWHO] [RS-EPT-CBR] [TIM] |
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Reference(s): |
[3] Huerta AM., et al., 2003 [4] Salgado H, et al., 2012 [2] Wolfe SA., et al., 1988 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | MarA | repressor | purAp | 4404611 | 4404630 | -43.0 | cgaggtcattTTTGAGTGCAAAAAGTGCTGtaactctgaa | nd | [GEA], [APIORCISFBSCS], [BPP], [SM] | [7] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | PurR-hypoxanthine | repressor | purAp | 4404566 | 4404581 | -90.5 | ctacatgttgAGGAAAACGATTGGCTgaacaaaaaa | nd | [GEA], [APIORCISFBSCS], [BPP] | [5], [6] |
proximal | PurR-hypoxanthine | repressor | purAp | 4404665 | 4404680 | 9.5 | atccatttttAAGCAAACGGTGATTTtgaaaaatgg | nd | [GEA], [APIORCISFBSCS], [BPP] | [5], [6] |
Reference(s) |
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