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Name: | araJ | |||||||||
Synonym(s): | OP00139 | |||||||||
Gene(s): | araJ Genome Browser M3D Gene expression COLOMBOS | |||||||||
Reference(s): | [1] Reeder T., et al., 1991 | |||||||||
Promoter | ||||||||||
Name: | araJp | |||||||||
+1: | 412529 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 48 | |||||||||
Sequence: |
gaatacagaggggcgaattatctcttggccttgctggtcgttatcctgcaagctatcactTtattggctacggtgattggt -35 -10 +1 |
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Evidence: |
[ICWHO] [TIM] |
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Reference(s): |
[2] Hendrickson W., et al., 1990 [3] Huerta AM., et al., 2003 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | AraC-α-L-arabinopyranose | activator | araJp | 412564 | 412580 | -43.0 | tgaatacagaGGGGCGAATTATCTCTTggccttgctg | nd | [AIBSCS], [BPP] | [2] |
proximal | AraC-α-L-arabinopyranose | activator | araJp | 412585 | 412601 | -64.0 | aataactattCAGCAGGATAATGAATAcagaggggcg | nd | [APIORCISFBSCS], [BPP] | [2] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | CRP-cyclic-AMP | activator | araJp | 412609 | 412630 | -90.5 | cagcaaactgGAAAGTACGTTTGCAGTGAAATaactattcag | nd | [APIORCISFBSCS], [BPP] | [2] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
remote | CRP-cyclic-AMP | repressor | araJp | 412475 | 412497 | 44.5 | gccgttctggTGGTTGTGATGGTGGTATGAAAAaagtcatttt | nd | [APIORCISFBSCS], [BPP] | [2] |
Reference(s) |
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