RegulonDB RegulonDB 10.8: Operon Form
   

araJ operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: araJ
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: araJ
Synonym(s): OP00139
Gene(s): araJ   Genome Browser M3D Gene expression COLOMBOS
Reference(s): [1] Reeder T., et al., 1991
Promoter
Name: araJp
+1: 412529
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 48
Sequence: gaatacagaggggcgaattatctcttggccttgctggtcgttatcctgcaagctatcactTtattggctacggtgattggt
                         -35                      -10       +1                   
Evidence: [TIM]
Reference(s): [2] Hendrickson W., et al., 1990
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal AraC-arabinose activator araJp 412564 412580 -43.0 tgaatacagaGGGGCGAATTATCTCTTggccttgctg nd [AIBSCS], [BPP] [1], [2], [3]
proximal AraC-arabinose activator araJp 412585 412601 -64.0 aataactattCAGCAGGATAATGAATAcagaggggcg nd [APIORCISFBSCS], [BPP] [1], [2], [3]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cAMP activator araJp 412609 412630 -90.5 cagcaaactgGAAAGTACGTTTGCAGTGAAATaactattcag nd [APIORCISFBSCS], [BPP] [1], [2]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote CRP-cAMP repressor araJp 412475 412497 44.5 gccgttctggTGGTTGTGATGGTGGTATGAAAAaagtcatttt nd [APIORCISFBSCS], [BPP] [1], [2]





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