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Name: | cynTS | |||||||||
Gene(s): | cynT, cynS Genome Browser M3D Gene expression COLOMBOS | |||||||||
Evidence: | [BTEI] Boundaries of transcription experimentally identified [LTED] Length of transcript experimentally determined |
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Reference(s): | [1] Sung YC., et al., 1988 | |||||||||
Promoter | ||||||||||
Name: | cynTp | |||||||||
+1: | 358773 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 26 | |||||||||
Sequence: |
atggaactcatcataaatgagacttttaccttatgacaatcggcgagtagtctgcctctcAttccagagacagacagaggt -35 -10 +1 |
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Evidence: |
[HIPP] [ICWHO] [TIM] |
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Reference(s): |
[2] Huerta AM., et al., 2003 [3] Lamblin AF., et al., 1993 [1] Sung YC., et al., 1988 |
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Terminator(s) | ||||||||||
Type: | rho-independent | |||||||||
Sequence: | ttacccgcaaAGTGCGCTGCTGCTTAGCAGCGCACTgcttggtggg | |||||||||
Reference(s): | [1] Sung YC., et al., 1988 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | CynR-cyanate | activator | cynTp | 358700 | 358708 | -69.0 | ttcgcaacctATAAGTAAAtccaatggaa | nd | [GEA], [APIORCISFBSCS], [BPP] | [4] |
proximal | CynR-cyanate | activator | cynTp | 358738 | 358746 | -31.0 | aatgagacttTTACCTTATgacaatcggc | nd | [APIORCISFBSCS], [BPP] | [4] |
Name: | cynTSX | |||||||||
Synonym(s): | OP00193 | |||||||||
Gene(s): | cynT, cynS, cynX Genome Browser M3D Gene expression COLOMBOS | |||||||||
Evidence: | [BTEI] Boundaries of transcription experimentally identified [LTED] Length of transcript experimentally determined |
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Reference(s): |
[5] Anderson PM., et al., 1990 [4] Lamblin AF., et al., 1994 [1] Sung YC., et al., 1988 |
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Promoter | ||||||||||
Name: | cynTp | |||||||||
+1: | 358773 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 26 | |||||||||
Sequence: |
atggaactcatcataaatgagacttttaccttatgacaatcggcgagtagtctgcctctcAttccagagacagacagaggt -35 -10 +1 |
|||||||||
Evidence: |
[HIPP] [ICWHO] [TIM] |
|||||||||
Reference(s): |
[2] Huerta AM., et al., 2003 [3] Lamblin AF., et al., 1993 [1] Sung YC., et al., 1988 |
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Terminator(s) | ||||||||||
Type: | rho-independent | |||||||||
Sequence: | gaacttgtagGCCTGATAAGCGCAGCGTATCAGGCaatttttata | |||||||||
Reference(s): | [1] Sung YC., et al., 1988 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | CynR-cyanate | activator | cynTp | 358700 | 358708 | -69.0 | ttcgcaacctATAAGTAAAtccaatggaa | nd | [GEA], [APIORCISFBSCS], [BPP] | [4] |
proximal | CynR-cyanate | activator | cynTp | 358738 | 358746 | -31.0 | aatgagacttTTACCTTATgacaatcggc | nd | [APIORCISFBSCS], [BPP] | [4] |
Reference(s) |
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