RegulonDB RegulonDB 10.8: Operon Form

amn operon and associated TUs in Escherichia coli K-12 genome

Name: amn
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: amn
Gene(s): amn   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Name: amnp1
+1: 2055031
Distance from start of the gene: 30
Sequence: agatcatccgatcttcgccttacacttttgtttcacatttctgtgacatactatcggatgTgcggtaattgtatggaacag
Note(s): For the amn transcription unit, just one promoter has been reported, but six transcription start sites were found. Therefore, here we annotate just one transcription start site, the one closer to 10 bp downstream of the promoter, as we considered it the most appropriate.
Evidence: [HIPP]
Reference(s): [1] Leung HB., et al., 1989
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal PhoB-Phosphorylated activator amnp1 2054989 2055007 -33.0 cgatcttcgcCTTACACTTTTGTTTCACAtttctgtgac nd [AIBSCS], [CV(GEA)], [GEA] [2]