RegulonDB RegulonDB 11.1: Operon Form
   

uvrYC operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: uvrYC
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: uvrC
Gene(s): uvrC   Genome Browser M3D Gene expression COLOMBOS
Promoter
Name: uvrCp3
+1: 1994879
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 173
Sequence: gaaaaaacagaaagcccatttgccagtttgtctgaacgtgaattgcagattatgctgatgAtcaccaagggccagaaggtc
                                 -35                    -10 +1                   
Evidence: [COMP-AINF]
[COMP-HINF-POSITIONAL-IDENTIFICATION]
[EXP-IDA-TRANSCRIPTION-INIT-MAPPING]
Reference(s): [1] Huerta AM., et al., 2003
[2] van Sluis CA., et al., 1983
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd LexA repressor uvrCp3 nd nd nd nd nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS] W [3]


Transcription unit          
Name: uvrYC
Gene(s): uvrC, uvrY   Genome Browser M3D Gene expression COLOMBOS
Reference(s): [4] Moolenaar GF., et al., 1987
Promoter
Name: uvrYp2
+1: 1995406
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 47
Sequence: aaaatcgaatacccaccatttttaacgtttcaaagttgcaataaaaaccgctaatatacgAatgactaactatcagtagcg
                                  -35                    -10+1                   
Evidence: [COMP-AINF]
[COMP-HINF-POSITIONAL-IDENTIFICATION]
[EXP-IDA-TRANSCRIPTION-INIT-MAPPING]
Reference(s): [1] Huerta AM., et al., 2003
[4] Moolenaar GF., et al., 1987
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote LexA repressor uvrYp2 1995526 1995545 -129.5 tcgtagggctTACTGTGAAACGATCCGGTAagccgttggt nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] W [3]





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