RegulonDB RegulonDB 10.10: Operon Form
   

ssuEADCB operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: ssuEADCB
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: ssuEADCB
Gene(s): ssuB, ssuC, ssuD, ssuA, ssuE   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
Reference(s): [1] van Der Ploeg JR., et al., 1999
Promoter
Name: ssuEp
+1: 997563
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 51
Sequence: cagaaaaagatacacaaaatttatatttggaattttcttgtctctccgacagactgaccgAattgttatcaatgttaacaa
                           -35                    -10       +1                   
Evidence: [HIPP]
[ICWHO]
[TIM]
Reference(s): [2] Huerta AM., et al., 2003
[1] van Der Ploeg JR., et al., 1999
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal Cbl activator ssuEp 997598 997637 -54.5 aaagccctttCTTTAGTTTATTTTCAGAAAAAGATACACAAAATTTATATttggaatttt nd [GEA], [BPP] [3]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CysB-O-acetyl-L-serine repressor ssuEp 997560 997601 -18.0 cacaaaatttATATTTGGAATTTTCTTGTCTCTCCGACAGACTGACCGAATTgttatcaatg nd [GEA], [BPP] [1], [3]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd FNR activator ssuEp nd nd nd nd nd [GEA], [BPP] [4]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote IHF activator ssuEp 997691 997703 -134.0 actgaacgagTAATTCATTGATTcaacatctaa nd [GEA], [APIORCISFBSCS], [BPP] [1]
remote IHF activator ssuEp 997734 997746 -177.0 gacaaatcttTAATTTATAGATTtcatgaatat nd [GEA], [APIORCISFBSCS], [BPP] [1]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote IHF repressor ssuEp 997525 997537 33.0 aacaaaaaaaGAACAATTGGTTAtaaggagaga nd [GEA], [APIORCISFBSCS], [BPP] [1]





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