RegulonDB RegulonDB 10.7: Operon Form
   

mngAB operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: mngAB
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: mngAB
Gene(s): mngA, mngB   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
Reference(s): [1] Sampaio MM., et al., 2004
Promoter
Name: mngAp
+1: 765811
Sigma Factor: Sigma32 Sigmulon
Distance from start of the gene: 173
Sequence: ctgacgccaaactctgtttgtagcgctgattcagtgggtaacgcatcgccaggtttaagcTcgccacgcgcaatttgttca
                              -35              -10          +1                   
Evidence: [HIPP]
[IC]
Reference(s): [2] Gama-Castro S., et al., 2008
[1] Sampaio MM., et al., 2004
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote MngR repressor mngAp 765890 765911 90.5 agtatctcatTAATACGAATTTAACCATTATGcccgataaat nd [APIORCISFBSCS], [BPP] [1], [3]
remote MngR repressor mngAp 765934 765955 134.5 atcctgtaaaTAATACAAATACAATACAAATAatttcaatca nd [APIORCISFBSCS], [BPP], [GEA] [1], [3]


Transcription unit       
Name: mngB
Gene(s): mngB   Genome Browser M3D Gene expression COLOMBOS
Evidence: [IEP] Inferred from expression pattern
Reference(s):
Promoter
Name: mngBp2
+1: 767795
Distance from start of the gene: 183
Sequence: aacgggcgctattgtcggtgcgatgaatatcggcctttcgacacccggtgccggcattttCtcgctctttttacttcatga
Evidence: [RE]
[TIM]
Reference(s):


Transcription unit       
Name: mngB
Gene(s): mngB   Genome Browser M3D Gene expression COLOMBOS
Evidence: [IEP] Inferred from expression pattern
Reference(s): [5] Li Z., et al., 2019
Promoter
Name: mngBp
+1: 767825
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 153
Sequence: cggcctttcgacacccggtgccggcattttctcgctctttttacttcatgataatggcgcGggcggtgttatggcggcaat
                                                  -10       +1                   
Evidence: [RE]
[TIM]
Reference(s): [5] Li Z., et al., 2019





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