Name: |
idnK |
Gene(s): |
idnK
Genome Browser
M3D Gene expression
COLOMBOS
|
Evidence: |
[BTEI] Boundaries of transcription experimentally identified |
Reference(s): |
[1] Bausch C., et al., 2004
|
Promoter |
|
Name: |
idnKp |
+1: |
4494597 |
Sigma Factor: |
Sigma70 Sigmulon |
Distance from start of the gene: |
26
|
Sequence: |
tcttatcagtagaaataaaaaaacgtgaaattattatgccgccaggcgtagtatcgcagcAggtaagatgattcaggagat -35 -10 +1
|
Evidence: |
[ICWHO] [TIM]
|
Reference(s): |
[1] Bausch C., et al., 2004 [2] Huerta AM., et al., 2003 [3] Tsunedomi R., et al., 2003
|
Type |
Transcription factor |
Function |
Promoter |
Binding Sites |
Growth Conditions |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
LeftPos |
RightPos |
Central Rel-Pos |
Sequence |
proximal |
IdnR
|
activator |
idnKp |
4494506
|
4494521
|
-83.5
|
ttacattactATGTTACGCATAACGTgatgtgcctt |
nd
|
[GEA], [AIBSCS]
|
[3], [5]
|
Transcription factor |
Function |
Promoter |
Binding Sites |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
LeftPos |
RightPos |
Central Rel-Pos |
Sequence |
CRP-cyclic-AMP |
activator |
idnKp |
4494466
|
4494488
|
-120.5
|
aactgtcattATTTGTGATGAAGATCACGTCAGaaaattgtta
|
[GEA]
|
[1], [3], [4]
|
GntR |
repressor |
idnKp |
4494484
|
4494503
|
-103.5
|
tgaagatcacGTCAGAAAATTGTTACATTActatgttacg
|
[GEA]
|
[3]
|
IdnR |
activator |
idnKp |
4494506
|
4494521
|
-83.5
|
ttacattactATGTTACGCATAACGTgatgtgcctt
|
[GEA]
|
[3], [5]
|
GntR |
repressor |
idnKp |
4494504
|
4494523
|
-83.5
|
tgttacattaCTATGTTACGCATAACGTGAtgtgccttgt
|
[GEA]
|
[3]
|
CRP-cyclic-AMP |
activator |
idnKp |
4494516
|
4494537
|
-70.5
|
atgttacgcaTAACGTGATGTGCCTTGTAATTcttatcagta
|
[GEA]
|
[1], [3]
|
GntR |
repressor |
idnKp |
4494534
|
4494553
|
-53.5
|
tgtgccttgtAATTCTTATCAGTAGAAATAaaaaaacgtg
|
[GEA]
|
[3]
|