RegulonDB RegulonDB 10.6.3: Operon Form
   

uxuR operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: uxuR
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: uxuR
Gene(s): uxuR   Genome Browser M3D Gene expression COLOMBOS
Evidence: [IEP] Inferred from expression pattern
[IMP] Inferred from mutant phenotype
Reference(s): [1] Ritzenthaler P., et al., 1981
Promoter
Name: uxuRp
+1: 4554458
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 118
Sequence: actgatatttggttgaccagttttcgtttttttgcccacctgtacgtgccaacttccagtGctaatggtatagtttgagat
                           -35                    -10       +1                   
Evidence: [AIPP]
Reference(s): [2] Huerta AM., et al., 2003
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd CRP-cAMP activator uxuRp nd nd nd nd nd [GEA], [HIBSCS] [5], [6]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal ExuR repressor uxuRp 4554403 4554420 -46.5 atcaaactgaTATTTGGTTGACCAGTTTtcgttttttt nd [AIBSCS], [GEA] [3], [4], [5]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal UxuR repressor uxuRp 4554383 4554400 -66.5 ccctacagacTTACTGGTCAATCAAACTgatatttggt nd [AIBSCS] [3]
proximal UxuR repressor uxuRp 4554403 4554420 -46.5 atcaaactgaTATTTGGTTGACCAGTTTtcgttttttt nd [AIBSCS], [GEA] [3], [4], [5]
remote UxuR repressor uxuRp 4554542 4554559 93.5 atccggcaaaAATTTGATTAACCGCACCtaacggacac nd [AIBSCS], [GEA] [3]





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