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Name: | artPIQM |
Gene(s): | artM, artQ, artI, artP Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [BTEI] Boundaries of transcription experimentally identified |
Reference(s): |
[1] Wissenbach U., et al., 1993 [2] Wissenbach U., et al., 1995 |
Promoter | |
Name: | artPp |
+1: | 903769 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 35 |
Sequence: |
ttttaacttttaaagcagaaatattgcataattattctgtcaaaggtactatcttcgaccTcaatagctatcagactgcca -35 -10 +1 |
Note(s): | Inhibition of artPp by ArgR is mediated by steric exclusion of the RNA polymerase Caldara M,2007 |
Evidence: |
[HIPP] [TIM] |
Reference(s): |
[3] Caldara M., et al., 2007 [2] Wissenbach U., et al., 1995 |
Terminator(s) | |
Type: | rho-dependent |
Sequence: | tgaaataaaaAAGACGGACAACTTAGTGGGTTGTCCGTCTTcattataaga |
Reference(s): | [2] Wissenbach U., et al., 1995 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | ArgR-L-arginine | repressor | artPp | 903790 | 903808 | -29.5 | aaagcagaaaTATTGCATAATTATTCTGTcaaaggtact | nd | [AIBSCS], [BPP], [CV(GEA)], [CV(GEA)], [CV(GEA/SM)], [CV(SM)], [GEA], [SM] | [3], [4], [5] |
proximal | ArgR-L-arginine | repressor | artPp | 903811 | 903829 | -50.5 | tgcgctttgcTTTTAACTTTTAAAGCAGAaatattgcat | nd | [BPP], [CV(SM)], [GEA], [SM] | [3] |
Name: | artPIQM |
Gene(s): | artM, artQ, artI, artP Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [BTEI] Boundaries of transcription experimentally identified |
Reference(s): | [2] Wissenbach U., et al., 1995 |
Promoter | |
Name: | artPp1 |
+1: | 903815 |
Sigma Factor: | Sigma38 Sigmulon |
Distance from start of the gene: | 81 |
Sequence: |
ccgcccccgttattttgtgctatgtttattgaataatgcgctttgcttttaacttttaaaGcagaaatattgcataattat -35 -10 +1 |
Evidence: | [TIM] |
Reference(s): | [6] Lacour S., et al., 2004 |
Terminator(s) | |
Type: | rho-dependent |
Sequence: | tgaaataaaaAAGACGGACAACTTAGTGGGTTGTCCGTCTTcattataaga |
Reference(s): | [2] Wissenbach U., et al., 1995 |
Name: | artPIQM |
Gene(s): | artM, artQ, artI, artP Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [BTEI] Boundaries of transcription experimentally identified |
Reference(s): | [2] Wissenbach U., et al., 1995 |
Promoter | |
Name: | artPp2 |
+1: | 903836 |
Sigma Factor: | Sigma38 Sigmulon |
Distance from start of the gene: | 102 |
Sequence: |
gacatttatgctcgccgaccaccgcccccgttattttgtgctatgtttattgaataatgcGctttgcttttaacttttaaa -35 -10 +1 |
Evidence: | [TIM] |
Reference(s): | [6] Lacour S., et al., 2004 |
Terminator(s) | |
Type: | rho-dependent |
Sequence: | tgaaataaaaAAGACGGACAACTTAGTGGGTTGTCCGTCTTcattataaga |
Reference(s): | [2] Wissenbach U., et al., 1995 |
Name: | artPIQM |
Gene(s): | artM, artQ, artI, artP Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [BTEI] Boundaries of transcription experimentally identified |
Reference(s): | [2] Wissenbach U., et al., 1995 |
Promoter | |
Name: | artPp3 |
+1: | 903843 |
Sigma Factor: | Sigma38 Sigmulon |
Distance from start of the gene: | 109 |
Sequence: |
gaatgccgacatttatgctcgccgaccaccgcccccgttattttgtgctatgtttattgaAtaatgcgctttgcttttaac -35 -10 +1 |
Evidence: | [TIM] |
Reference(s): | [6] Lacour S., et al., 2004 |
Terminator(s) | |
Type: | rho-dependent |
Sequence: | tgaaataaaaAAGACGGACAACTTAGTGGGTTGTCCGTCTTcattataaga |
Reference(s): | [2] Wissenbach U., et al., 1995 |
Reference(s) |
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