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Name: | mdtABCD-baeSR |
Gene(s): | mdtA, mdtB, mdtC, mdtD, baeS, baeR Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [ITC] Inferred through co-regulation [LTED] Length of transcript experimentally determined |
Reference(s): | [1] Nagakubo S., et al., 2002 |
Promoter | |
Name: | mdtAp |
+1: | 2153979 |
Sigma Factor: | Sigma38 Sigmulon |
Distance from start of the gene: | 37 |
Sequence: |
ccagacagtgtttcataattcctccatttttctcccttattggctggctacactagtatcAttccgcgaaacgtttcagga -35 -10 +1 |
Evidence: | [AIPP] |
Reference(s): | [2] Gama-Castro S., et al., 2008 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | BaeR-Phosphorylated | activator | mdtAp | 2153942 | 2153961 | -27.5 | cataattcctCCATTTTTCTCCCTTATTGGctggctacac | nd | [AIBSCS], [BPP], [CV(GEA)], [CV(GEA)], [GEA] | [1], [3], [4], [5] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
remote | CpxR-Phosphorylated | activator | mdtAp | 2153843 | 2153859 | -128.5 | cagtctatcgCTAACGCGTAGATAAAAtagtttcctg | nd | [BPP], [CV(GEA)], [CV(GEA)], [GEA], [IC] | [3] |
proximal | CpxR-Phosphorylated | activator | mdtAp | 2153906 | 2153920 | -66.5 | atgtgcccgtCATTCAGACGATTCCagacagtgtt | nd | [BPP], [CV(GEA)], [CV(GEA)], [GEA], [IC] | [3] |
Name: | baeSR |
Gene(s): | baeS, baeR Genome Browser M3D Gene expression COLOMBOS |
Reference(s): | [6] Nagasawa S., et al., 1993 |
Reference(s) |
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