Name: |
mdtABCD-baeSR |
Gene(s): |
mdtA, mdtB, mdtC, mdtD, baeS, baeR
Genome Browser
M3D Gene expression
COLOMBOS
|
Evidence: |
[ITCR] Inferred through co-regulation [LTED] Length of transcript experimentally determined |
Reference(s): |
[1] Nagakubo S., et al., 2002
|
Promoter |
|
Name: |
mdtAp |
+1: |
2153979 |
Sigma Factor: |
Sigma38 Sigmulon |
Distance from start of the gene: |
37
|
Sequence: |
ccagacagtgtttcataattcctccatttttctcccttattggctggctacactagtatcAttccgcgaaacgtttcagga -35 -10 +1
|
Evidence: |
[AIPP] [ICWHO]
|
Reference(s): |
[2] Gama-Castro S., et al., 2008 [3] Huerta AM., et al., 2003
|
Transcription factor |
Function |
Promoter |
Binding Sites |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
LeftPos |
RightPos |
Central Rel-Pos |
Sequence |
CpxR-phosphorylated |
activator |
mdtAp |
2153843
|
2153859
|
-128.5
|
cagtctatcgCTAACGCGTAGATAAAAtagtttcctg
|
[GEA], [IC]
|
[4]
|
CpxR-phosphorylated |
activator |
mdtAp |
2153906
|
2153920
|
-66.5
|
atgtgcccgtCATTCAGACGATTCCagacagtgtt
|
[GEA], [IC]
|
[4]
|
BaeR-phosphorylated |
activator |
mdtAp |
2153942
|
2153961
|
-27.5
|
cataattcctCCATTTTTCTCCCTTATTGGctggctacac
|
[GEA]
|
[1], [4], [5]
|