Name: |
rbsDACBKR |
Synonym(s): |
OP00289 |
Gene(s): |
rbsD, rbsA, rbsC, rbsB, rbsK, rbsR
Genome Browser
M3D Gene expression
COLOMBOS
|
Note(s): |
A site for the RbsR transcriptional regulator was also identified in the rbsDACBKR operon based on genomic Selex analysis Shimada T,2013 Disruption of the rbsK, rbsR, hdfR, and crl genes decrease resistance to high hydrostatic pressure (HHP) Gayán E, Rutten N, Van Impe J, Michiels CW, Aertsen A,2019 |
Evidence: |
[BTEI] Boundaries of transcription experimentally identified |
Reference(s): |
[1] Bell AW., et al., 1986 [2] Burland V., et al., 1993
|
Promoter |
|
Name: |
rbsDp |
+1: |
3933322 |
Sigma Factor: |
Sigma70 Sigmulon |
Distance from start of the gene: |
29
|
Sequence: |
atcacatttccgtaacgtcacgatggttttcccaactcagtcaggattaaactgtgggtcAgcgaaacgtttcgctgatgg -35 -10 +1
|
Evidence: |
[ICWHO] [TIM]
|
Reference(s): |
[1] Bell AW., et al., 1986 [3] Huerta AM., et al., 2003
|
Transcription factor |
Function |
Promoter |
Binding Sites |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
LeftPos |
RightPos |
Central Rel-Pos |
Sequence |
CRP-cyclic-AMP |
activator |
rbsDp |
3933249
|
3933270
|
-62.5
|
ccatgtaaaaCGTTTCGAGGTTGATCACATTTccgtaacgtc
|
[GEA]
|
[1], [5]
|
RbsR |
repressor |
rbsDp |
3933320
|
3933339
|
8.5
|
aaactgtgggTCAGCGAAACGTTTCGCTGAtggagaaaaa
|
[GEA]
|
[6], [7]
|
sRNA |
TU Regulated |
Function |
Binding Sites |
Regulatory Mechanism |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
PosLeft |
PosRight |
Target sequence (mRNA) |
small regulatory RNA DsrA
|
rbsDACBKR
|
repressor
|
3933649
|
3933663
|
AAAUUCGUUACACCA
|
MRNA-DEGRADATION
|
[IDA], [NABE], [SM]
|
[4]
|