RegulonDB RegulonDB 10.8: Operon Form
   

insK operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: insK
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: insK
Synonym(s): dinS
Gene(s): insK   Genome Browser M3D Gene expression COLOMBOS
Evidence: [LTED] Length of transcript experimentally determined
Reference(s): [1] Fernandez De Henestrosa AR., et al., 2000
Promoter
Name: insKp
+1: 3721065
Sigma Factor: Sigma24 Sigmulon
Distance from start of the gene: 133
Sequence: aagctggtttacgcgcgctcaagattggcaccaaaagaaacattgcaatatcagttgatcCagaaaaagcggcatcagcat
                                -35                   -10   +1                   
Evidence: [HIPP]
Reference(s): [2] Gama-Castro S., et al., 2008
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd LexA1 repressor insKp nd nd nd nd nd [AIBSCS], [CV(GEA)], [GEA] [1]
Note(s): 1This site was determined by computational searches, and its inducibility was analyzed by Northern analysis in a variety of lexA backgrounds. The sequence of the site is CTGTATTTGTCTCCAG, and its absolute position is 3719642.5. We have given the absolute position in the genome of E. coli for this site instead of the central position, since the +1 site of the transcription initiation has not yet been determined Fernandez De Henestrosa AR,20001This site was determined by computational searches, and its inducibility was analyzed by Northern analysis in a variety of lexA backgrounds. The sequence of the site is CTGTATTTGTCTCCAG, and its absolute position is 3719642.5. We have given the absolute position in the genome of E. coli for this site instead of the central position, since the +1 site of the transcription initiation has not yet been determined Fernandez De Henestrosa AR,2000





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