RegulonDB RegulonDB 10.10: Operon Form
   

recN operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: recN
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: recN
Gene(s): recN   Genome Browser M3D Gene expression COLOMBOS
Note(s): The recN gene is repressed by both DnaA and LexA in an independent manner, but the two proteins act in an additive manner during the SOS response Wurihan,2018
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: recNp
+1: 2751759
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 36
Sequence: aattattctaattttacgccagcctctttactgtatataaaaccagtttatactgtacacAataacagtaatggtttttca
                           -35                   -10        +1                   
Evidence: [HIPP]
[ICWHO]
Reference(s): [1] Huerta AM., et al., 2003
[2] Rostas K., et al., 1987
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal DnaA-ATP repressor recNp 2751730 2751738 -25.0 gcctctttacTGTATATAAaaccagttta nd [GEA], [ICA] [3]
proximal DnaA-ATP repressor recNp 2751751 2751759 -4.0 ccagtttataCTGTACACAataacagtaa nd [GEA], [ICA] [3]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal LexA repressor recNp 2751727 2751746 -22.5 ccagcctcttTACTGTATATAAAACCAGTTtatactgtac nd [GEA], [AIBSCS], [BPP] [2], [3]
proximal LexA repressor recNp 2751749 2751768 -0.5 aaccagtttaTACTGTACACAATAACAGTAatggtttttc nd [GEA], [AIBSCS], [BPP] [2], [3]





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