RegulonDB RegulonDB 10.8: Operon Form
   

ydhIJK operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: ydhIJK
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: ydhIJK
Gene(s): ydhI, ydhJ, ydhK   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
Promoter
Name: ydhIp
+1: 1720998
Sigma Factor: Sigma24 Sigmulon
Distance from start of the gene: 27
Sequence: ttttcagaaattgcgcgtaaatttttcgcacttaaagaatatttattaatctaacgcaatAtattcggtcgtaaaggaatc
                            -35                   -10       +1                   
Note(s): This promoters appears to be weakly induced, compared with other induced genes, during σE induction Lacoux C,2020. However, its mRNA appears to be very stable Lacoux C,2020.
Evidence: [AIPP]
[TIM]
Reference(s): [1] Rhodius VA., et al., 2005


Evidence    

 [AIPP] Automated inference of promoter position

 [TIM] Transcription initiation mapping


Reference(s)    

 [1] Rhodius VA., Suh WC., Nonaka G., West J., Gross CA., 2005, Conserved and variable functions of the sigmaE stress response in related genomes., PLoS Biol 4(1):e2

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