RegulonDB RegulonDB 10.7: Operon Form
   

ybiT operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: ybiT
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: ybiT
Gene(s): ybiT   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISDTU] Automated inference that a single-gene directon is a transcription unit
Promoter
Name: ybiTp
+1: 855947
Distance from start of the gene: 16
Sequence: taagcgaggagcaggatcttctttcagacttatggcataatgcgcggtttgtcatatctcTtttcaggatacgcctgtgtt
Evidence: [HTIM]
Reference(s): [1] Raghavan R., et al., 2011
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote AscG repressor ybiTp 855832 855846 -108.5 cagctcacagTGAAATCAGATGTGTacgaaatcac nd [AIBSCS], [BPP] [2]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote CRP-cAMP activator ybiTp 855839 855861 -97.5 cagtgaaatcAGATGTGTACGAAATCACATTTTttgcctttgg nd [AIBSCS], [APIORCISFBSCS], [GEA] [1], [3], [4]
remote CRP-cAMP repressor ybiTp 855839 855861 -97.5 cagtgaaatcAGATGTGTACGAAATCACATTTTttgcctttgg nd [AIBSCS], [APIORCISFBSCS], [GEA] [1], [3], [4]





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