RegulonDB RegulonDB 10.6.3: Operon Form
   

yidL operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: yidL
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: yidL
Gene(s): yidL   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit
Promoter
Name: yidLp
+1: 3860253
Distance from start of the gene: 30
Sequence: agattcttaaaatacaaacgtcgtatccctgaacggattgttttctgttaagttcaggttGtgagcataattcgccggagg
Evidence: [TIM]
Reference(s): [1] Salscheider SL., et al., 2014
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal RcsB-BglJ activator yidLp 3860192 3860212 -51.5 gtcaggcagtCAGATTCTTAAAATACAAACGtcgtatccct nd [AIBSCS], [GEA] [1]


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Translational
Strand: forward
Evidence: [ICA] Inferred by computational analysis
Reference(s): [2] null null
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -8.7 3860220 3860250 cgtcgtatccCTGAACGGATTGTTTTCTGTTAAGTTCAGGttgtgagcat
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"





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