RegulonDB RegulonDB 10.7: Operon Form
   

gpmA operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: gpmA
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: gpmA
Gene(s): gpmA   Genome Browser M3D Gene expression COLOMBOS
Promoter
Name: gpmAp
+1: 787632
Sigma Factor: Sigma70, Sigma38
Distance from start of the gene: 37
Sequence: tattttcgctatggttatgcgtaagcattgctgttgcttcgtcgcggcaatataatgagaAttattatcattaaaagatga
                           -35                    -10       +1                   
Evidence: [AIPP]
[HTIM]
[RS-EPT-CBR]
Reference(s): [1] Olvera L., et al., 2009
[2] Salgado H, et al., 2012
[3] Vassinova N., et al., 2000
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal Fur-Fe2+ repressor gpmAp 787618 787636 6.0 gcaatataatGAGAATTATTATCATTAAAagatgatttg nd [AIBSCS], [GEA] [3]
proximal Fur-Fe2+ repressor gpmAp 787621 787639 3.0 gcggcaatatAATGAGAATTATTATCATTaaaagatgat nd [AIBSCS], [APIORCISFBSCS], [BPP], [GEA] [3], [4]


Transcription unit       
Name: gpmA
Gene(s): gpmA   Genome Browser M3D Gene expression COLOMBOS
Promoter
Name: gpmAp2
+1: 787670
Sigma Factor: Sigma70, Sigma38
Distance from start of the gene: 75
Sequence: tgcaactcaatattcacaacaaccttacactgcgccactattttcgctatggttatgcgtAagcattgctgttgcttcgtc
                                               -10          +1                   
Evidence: [HTIM]
[RS-EPT-CBR]
Reference(s): [1] Olvera L., et al., 2009
[2] Salgado H, et al., 2012





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