RegulonDB RegulonDB 10.6.3: Operon Form

dgkA operon and associated TUs in Escherichia coli K-12 genome

Name: dgkA
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: dgkA
Gene(s): dgkA   Genome Browser M3D Gene expression COLOMBOS
Name: dgkAp1
+1: 4256457
Distance from start of the gene: 180
Sequence: acttgctttttaccaggatgcttaatggtaaattcagtaatttgtagtaaattcgtggccAgccggacataaacgatgtaa
Evidence: [IEP]
Reference(s): [1] Salgado H, et al., 2012
[2] Wahl A., et al., 2011
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal BasR-Phosphorylated activator dgkAp1 4256417 4256436 -30.5 taccaggatgCTTAATGGTAAATTCAGTAAtttgtagtaa nd [BPP], [GEA], [HIBSCS], [SM] [2]

Transcription unit       
Gene(s): dgkA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Name: dgkAp
+1: 4256608
Distance from start of the gene: 29
Sequence: tcatgtttcgcgcggcgctacgcaaacccgaatcatcggatttaacggtacactgatattGacgctcataatgtaaaaagg
Evidence: [HTTIM]    
Reference(s): [3] Mendoza-Vargas A., et al., 2009