Name: |
ecnB |
Gene(s): |
ecnB
Genome Browser
M3D Gene expression
COLOMBOS
|
Evidence: |
[BTEI] Boundaries of transcription experimentally identified [LTED] Length of transcript experimentally determined |
Reference(s): |
[1] Bishop RE., et al., 1998
|
Promoter |
|
Name: |
ecnBp |
+1: |
4376509 |
Sigma Factor: |
Sigma38 Sigmulon |
Distance from start of the gene: |
44
|
Sequence: |
ttctcttccgaaaaatcatcagattcccatcatttttggcgatgttgtctattattaattTgctataggcaaacataaata -35 -10 +1
|
Evidence: |
[ICWHO] [IEP] [IHBCE] [TIM]
|
Reference(s): |
[1] Bishop RE., et al., 1998 [2] Huerta AM., et al., 2003
|
Terminator(s) |
|
Type: |
rho-independent |
Sequence: |
aataagcaatAACGGTACGACAGCTGTGTCGTGCCGTttgttttttc |
Reference(s): |
[1] Bishop RE., et al., 1998
|
Transcription factor |
Function |
Promoter |
Binding Sites |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
LeftPos |
RightPos |
Central Rel-Pos |
Sequence |
OmpR-phosphorylated |
repressor |
ecnBp |
4376517
|
4376536
|
18.5
|
tttgctatagGCAAACATAAATAACATTACctaaaaggaa
|
nd
|
[1]
|
sRNA |
TU Regulated |
Function |
Binding Sites |
Regulatory Mechanism |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
PosLeft |
PosRight |
Target sequence (mRNA) |
small regulatory RNA MicA
|
ecnB
|
repressor
|
4376542
|
4376572
|
AGGAAGACGUUAUGGUGAAGAAGACAAUUGC
|
nd
|
[IEP]
|
[3]
|