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Name: | recQ |
Gene(s): | recQ Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [ICWHO] Inferred computationally without human oversight |
Promoter | |
Name: | recQp |
+1: | 4005836 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 28 |
Sequence: |
ttaccctctcagagactaaaagcattgcagtttctcgcgcaggcgctgaaaatagcgcctGtttttatttcaggcaatcgg -35 -10 +1 |
Note(s): | The transcription start site of recQp could be the G at genomic position 4005836 Irino N,1986 |
Evidence: | [IHBCE] |
Reference(s): | [1] Irino N., et al., 1986 |
Terminator(s) | |
Type: | rho-independent |
Sequence: | gtatgaagacTCCGTAAACGTTTCCCCCGCGAGTCAAATGTATGTTGAtgttatttct |
Reference(s): | [1] Irino N., et al., 1986 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | LexA1 | repressor | recQp | 4005834 | 4005849 | 6.0 | aaaatagcgcCTGTTTTTATTTCAGGcaatcggggt | nd | [APIORCISFBSCS], [CV(GEA)], [GEA] | [1] |
Note(s): | 1The recQ gene is under the control of the SOS system through the LexA transcriptional repressor Irino N,19861The recQ gene is under the control of the SOS system through the LexA transcriptional repressor Irino N,1986 |
RNA cis-regulatory element | ![]() |
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Regulation, transcriptional elongation | |
Attenuator type: | Transcriptional |
Strand: | forward |
Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
---|---|---|---|---|---|
terminator | -16.0 | 4005814 | 4005845 | gtttctcgcgCAGGCGCTGAAAATAGCGCCTGTTTTTATTTcaggcaatcg |
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |