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Name: | gspCDEFGHIJKLMO |
Gene(s): | gspC, gspD, gspE, gspF, gspG, gspH, gspI, gspJ, gspK, gspL, gspM, gspO Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [ICWHO] Inferred computationally without human oversight |
Promoter | |
Name: | gspCp1 |
+1: | 3455482 |
Distance from start of the gene: | 96 |
Sequence: |
attatccttaatcataaaaataatgtatgtatttattaattaaatacatattactaatatAaataaattttgcttgattca |
Evidence: | [TIM] |
Reference(s): | [1] Francetic O., et al., 2000 |
Name: | gspCDEFGHIJKLMO |
Gene(s): | gspC, gspD, gspE, gspF, gspG, gspH, gspI, gspJ, gspK, gspL, gspM, gspO Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [ICWHO] Inferred computationally without human oversight |
Promoter | |
Name: | gspCp2 |
+1: | 3455527 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 51 |
Sequence: |
acatattactaatataaataaattttgcttgattcatgcaagcggcattaatactatttaTactaacgtcaatatacaacc -35 -10 +1 |
Evidence: |
[HIPP] [ICWHO] [TIM] |
Reference(s): |
[1] Francetic O., et al., 2000 [2] Huerta AM., et al., 2003 |
Name: | gspCDEFGHIJKLMO | |||||||||
Gene(s): | gspC, gspD, gspE, gspF, gspG, gspH, gspI, gspJ, gspK, gspL, gspM, gspO Genome Browser M3D Gene expression COLOMBOS | |||||||||
Evidence: | [ICWHO] Inferred computationally without human oversight | |||||||||
Promoter | ||||||||||
Name: | gspCp3 | |||||||||
+1: | 3455531 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 47 | |||||||||
Sequence: |
attactaatataaataaattttgcttgattcatgcaagcggcattaatactatttatactAacgtcaatatacaacccacc -35 -10 +1 |
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Evidence: |
[HIPP] [ICWHO] [TIM] |
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Reference(s): |
[1] Francetic O., et al., 2000 [2] Huerta AM., et al., 2003 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
remote | Fur-Fe2+ | repressor | gspCp3 | 3455677 | 3455695 | 156.0 | gattatttttAATGTGAATTATTTCCATAcaactatagt | nd | [APIORCISFBSCS], [BPP] | [4] |
Reference(s) |
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