RegulonDB RegulonDB 10.10: Operon Form

yqhG operon and associated TUs in Escherichia coli K-12 genome

Name: yqhG
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: yqhG
Gene(s): yqhG   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Name: yqhGp
+1: 3157545
Distance from start of the gene: 105
Sequence: taccggacttttcagaaatcatttattcccctcgcgtcccgcccgttgttactcttccttGttcaggaatgccaaatataa
Evidence: [TIM]
Reference(s): [1] Salscheider SL., et al., 2014
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal RcsB-BglJ activator yqhGp 3157491 3157511 -44.5 ccgctaccggACTTTTCAGAAATCATTTATTcccctcgcgt nd [GEA], [AIBSCS] [1]

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Translational
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -10.9 3157607 3157642 aagaacaactCATCTATATCCGGGATAAACGCAACGGAGAGGTGAaaaacagatg
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"